Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmgn3Q9DCB1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Gm22121-201ENSMUST00000175148 54 ntBASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Gm19220-201ENSMUST00000222682 803 ntBASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Hmgn3Q9DCB1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Gm13689-201ENSMUST00000119360 685 ntBASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.4□□□□□ -0.58
Hmgn3Q9DCB1 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.4□□□□□ -0.59
Hmgn3Q9DCB1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms