Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm2553-201ENSMUST00000215986 605 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cldnd1Q9CQX5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm12948-201ENSMUST00000119406 682 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm14247-201ENSMUST00000120950 237 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm5257-201ENSMUST00000121823 790 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Mir6407-201ENSMUST00000184510 101 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Mt1-202ENSMUST00000211807 1085 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm19640-201ENSMUST00000214849 464 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm6722-201ENSMUST00000221586 390 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm4604-201ENSMUST00000025040 390 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm26035-201ENSMUST00000083065 308 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.41□□□□□ -0.42
Cldnd1Q9CQX5 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms