Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TpbpbQ9CQC0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
TpbpbQ9CQC0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm2495-201ENSMUST00000191160 466 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm20949-201ENSMUST00000206478 952 ntBASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.84□□□□□ -0.67
TpbpbQ9CQC0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.83□□□□□ -0.67
TpbpbQ9CQC0 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
TpbpbQ9CQC0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gm13492-201ENSMUST00000119772 665 ntBASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gm4768-201ENSMUST00000206199 686 ntBASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gm15823-201ENSMUST00000064305 670 ntBASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.83□□□□□ -0.68
TpbpbQ9CQC0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpbQ9CQC0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpbQ9CQC0 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.82□□□□□ -0.68
TpbpbQ9CQC0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TpbpbQ9CQC0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms