Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ska1Q9CPV1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ska1Q9CPV1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm6091-201ENSMUST00000098307 165 ntBASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ska1Q9CPV1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm26927-201ENSMUST00000182385 965 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm7561-201ENSMUST00000211203 886 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm7653-201ENSMUST00000214567 508 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Gm24526-201ENSMUST00000082921 158 ntBASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.51□□□□□ -0.57
Ska1Q9CPV1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms