Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm5700-201ENSMUST00000191483 989 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm19931-201ENSMUST00000198920 368 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col25a1Q99MQ5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm2965-201ENSMUST00000198365 343 ntBASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm43962-201ENSMUST00000203898 190 ntBASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col25a1Q99MQ5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms