Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm8738-201ENSMUST00000172606 329 ntBASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm29127-201ENSMUST00000188304 517 ntBASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm18304-201ENSMUST00000189162 546 ntBASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Gm45930-201ENSMUST00000221330 292 ntBASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkd1Q99MH6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Nkd1Q99MH6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.45□□□□□ -0.58
Nkd1Q99MH6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkd1Q99MH6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkd1Q99MH6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms