Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm8018-201ENSMUST00000173536 789 ntBASIC10.71□□□□□ -0.69
Scrt1Q99M85 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm8365-201ENSMUST00000197334 648 ntBASIC10.71□□□□□ -0.69
Scrt1Q99M85 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.71□□□□□ -0.69
Scrt1Q99M85 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.71□□□□□ -0.69
Scrt1Q99M85 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Scrt1Q99M85 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Scrt1Q99M85 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.71□□□□□ -0.7
Scrt1Q99M85 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Scrt1Q99M85 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.71□□□□□ -0.7
Scrt1Q99M85 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gm14058-201ENSMUST00000116082 735 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Gm28071-201ENSMUST00000190355 478 ntBASIC10.7□□□□□ -0.7
Scrt1Q99M85 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Scrt1Q99M85 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Scrt1Q99M85 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms