Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp1b1Q99LU0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm10434-201ENSMUST00000101158 471 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm15703-201ENSMUST00000120250 880 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm8018-201ENSMUST00000173536 789 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm38002-201ENSMUST00000193255 180 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp1b1Q99LU0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp1b1Q99LU0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Gm24231-201ENSMUST00000104315 133 ntBASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Gm43133-201ENSMUST00000197472 463 ntBASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp1b1Q99LU0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms