Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm14644-201ENSMUST00000116671 647 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm12015-201ENSMUST00000117065 843 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm27516-201ENSMUST00000184237 98 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm31256-201ENSMUST00000194705 506 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Olfr582-201ENSMUST00000098212 960 ntBASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb1Q91Y08 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm23270-201ENSMUST00000104055 131 ntBASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm3096-201ENSMUST00000185770 364 ntBASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm6334-201ENSMUST00000207083 228 ntBASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb1Q91Y08 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb1Q91Y08 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms