Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdhga3Q91XY5 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Gm23931-201ENSMUST00000103842 109 ntBASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Gm22018-201ENSMUST00000104357 131 ntBASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Gm12742-201ENSMUST00000117326 410 ntBASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Gm6023-201ENSMUST00000118217 606 ntBASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdhga3Q91XY5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Gm10434-201ENSMUST00000101158 471 ntBASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Gm44487-201ENSMUST00000205145 325 ntBASIC10.87□□□□□ -0.67
Pcdhga3Q91XY5 Gm6007-201ENSMUST00000208170 823 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms