Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhga4Q91XY4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm3096-201ENSMUST00000185770 364 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.03□□□□□ -0.48
Pcdhga4Q91XY4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhga4Q91XY4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm25043-201ENSMUST00000158604 212 ntBASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm10076-201ENSMUST00000073238 384 ntBASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhga4Q91XY4 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms