Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cuedc1Q8R3V6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm22121-201ENSMUST00000175148 54 ntBASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cuedc1Q8R3V6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm13996-201ENSMUST00000118456 430 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm44651-201ENSMUST00000207343 372 ntBASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cuedc1Q8R3V6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms