Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rftn2Q8CHX7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rftn2Q8CHX7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rftn2Q8CHX7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rftn2Q8CHX7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gm6905-201ENSMUST00000205729 511 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gm2553-201ENSMUST00000215986 605 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gm9797-202ENSMUST00000218003 294 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Gm10288-201ENSMUST00000084614 537 ntBASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rftn2Q8CHX7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Gm11663-201ENSMUST00000117888 290 ntBASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Gm12036-201ENSMUST00000120008 530 ntBASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rftn2Q8CHX7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rftn2Q8CHX7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 147.8 ms