Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox30Q8CGW4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm6114-201ENSMUST00000182472 968 ntBASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox30Q8CGW4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Gm25043-201ENSMUST00000158604 212 ntBASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Gm40466-201ENSMUST00000212174 422 ntBASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox30Q8CGW4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox30Q8CGW4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox30Q8CGW4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox30Q8CGW4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox30Q8CGW4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox30Q8CGW4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox30Q8CGW4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms