Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rdh1Q8CGV4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm26286-201ENSMUST00000104166 134 ntBASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm11509-201ENSMUST00000117358 325 ntBASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm25881-201ENSMUST00000157783 103 ntBASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rdh1Q8CGV4 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gm13035-201ENSMUST00000117496 342 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gm20426-201ENSMUST00000173657 440 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gm8343-201ENSMUST00000182705 994 ntBASIC11.8□□□□□ -0.52
Rdh1Q8CGV4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms