Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcpip1Q8CDG3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.08□□□□□ -0.31
Vcpip1Q8CDG3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vcpip1Q8CDG3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Vcpip1Q8CDG3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.08□□□□□ -0.31
Vcpip1Q8CDG3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vcpip1Q8CDG3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcpip1Q8CDG3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcpip1Q8CDG3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms