Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lysmd4Q8CC84 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lysmd4Q8CC84 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm9002-201ENSMUST00000178437 499 ntBASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lysmd4Q8CC84 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm14928-201ENSMUST00000120198 477 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm6244-201ENSMUST00000178732 841 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm27486-201ENSMUST00000184923 80 ntBASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lysmd4Q8CC84 Gm29705-201ENSMUST00000212598 474 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms