Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim9Q8C7M3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm9136-201ENSMUST00000193368 454 ntBASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm17931-201ENSMUST00000208132 634 ntBASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim9Q8C7M3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trim9Q8C7M3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim9Q8C7M3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm11989-201ENSMUST00000117240 672 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm14109-201ENSMUST00000118814 309 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm11362-201ENSMUST00000118838 850 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm5070-201ENSMUST00000177599 862 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm38341-201ENSMUST00000195357 515 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm43758-201ENSMUST00000199500 367 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim9Q8C7M3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim9Q8C7M3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms