Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.93□□□□□ -0.34
Trerf1Q8BXJ2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Mir1247-201ENSMUST00000116706 82 ntBASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm29396-201ENSMUST00000185659 716 ntBASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Olfr284-202ENSMUST00000206647 966 ntBASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm45930-201ENSMUST00000221330 292 ntBASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trerf1Q8BXJ2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm13786-201ENSMUST00000122371 333 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Mir8109-201ENSMUST00000184375 117 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm38158-201ENSMUST00000194617 339 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trerf1Q8BXJ2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms