Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm14921-201ENSMUST00000118643 908 ntBASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm23363-201ENSMUST00000175024 79 ntBASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Smco3Q8BQM7 Gm45191-201ENSMUST00000205846 5439 ntBASIC10□□□□□ -0.81
Smco3Q8BQM7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Retreg1-206ENSMUST00000228306 1430 ntBASIC10□□□□□ -0.81
Smco3Q8BQM7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10□□□□□ -0.81
Smco3Q8BQM7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Gm18307-201ENSMUST00000206864 949 ntBASIC10□□□□□ -0.81
Smco3Q8BQM7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10□□□□□ -0.81
Smco3Q8BQM7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10□□□□□ -0.81
Smco3Q8BQM7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Smco3Q8BQM7 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10□□□□□ -0.81
Smco3Q8BQM7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10□□□□□ -0.81
Smco3Q8BQM7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm23935-201ENSMUST00000102303 57 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Gm24270-201ENSMUST00000102326 57 ntBASIC9.99□□□□□ -0.81
Smco3Q8BQM7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms