Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm14381-201ENSMUST00000122105 414 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm7584-201ENSMUST00000175829 940 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm27046-201ENSMUST00000182160 463 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm43438-201ENSMUST00000198133 379 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm18711-201ENSMUST00000199341 750 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Atg4bQ8BGE6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Gm5070-201ENSMUST00000177599 862 ntBASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Gm37259-201ENSMUST00000193903 849 ntBASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Atg4bQ8BGE6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Map1b-203ENSMUST00000223725 2669 ntBASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Atg4bQ8BGE6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm13350-201ENSMUST00000120519 479 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm20482-202ENSMUST00000174729 825 ntBASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.45□□□□□ -0.58
Atg4bQ8BGE6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms