Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh19Q80TF3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Gm18038-201ENSMUST00000197900 485 ntBASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Gm43378-201ENSMUST00000199336 582 ntBASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdh19Q80TF3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Gm23949-201ENSMUST00000104027 127 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Gm15711-201ENSMUST00000118889 535 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Gm12566-201ENSMUST00000121479 359 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Mir5120-201ENSMUST00000175020 78 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Gm37666-201ENSMUST00000194110 866 ntBASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdh19Q80TF3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdh19Q80TF3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms