Protein–RNA interactions for Protein: Q7TT50

Cdc42bpb, Serine/threonine-protein kinase MRCK beta, mousemouse

Predictions only

Length 1,713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpbQ7TT50 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Gm7525-201ENSMUST00000219425 454 ntBASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Acot6-202ENSMUST00000222921 3622 ntBASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Gm25562-201ENSMUST00000104608 133 ntBASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Gm44323-201ENSMUST00000198689 129 ntBASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 AC153929.1-201ENSMUST00000219009 303 ntBASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdc42bpbQ7TT50 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Gm29763-201ENSMUST00000205306 616 ntBASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Gm5599-201ENSMUST00000209602 788 ntBASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdc42bpbQ7TT50 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cdc42bpbQ7TT50 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 AC165351.1-201ENSMUST00000219078 2020 ntBASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Gm44190-201ENSMUST00000205083 1401 ntBASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdc42bpbQ7TT50 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Mir1905-201ENSMUST00000122779 82 ntBASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm24992-201ENSMUST00000157412 130 ntBASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm9369-201ENSMUST00000196009 733 ntBASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm5340-201ENSMUST00000203733 880 ntBASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.07■□□□□ 0.32
Cdc42bpbQ7TT50 Gm8522-201ENSMUST00000118416 1929 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms