Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh8Q7TSK3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh8Q7TSK3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm22902-201ENSMUST00000158488 302 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm7003-201ENSMUST00000195089 312 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh8Q7TSK3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms