Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm12579-201ENSMUST00000118040 783 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm28388-201ENSMUST00000186262 437 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm17877-201ENSMUST00000192578 814 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm42657-201ENSMUST00000201746 211 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Snrnp40Q6PE01 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm15207-201ENSMUST00000119259 442 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm13937-201ENSMUST00000121000 988 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm11836-201ENSMUST00000121022 441 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm21092-201ENSMUST00000178995 955 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Snrnp40Q6PE01 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Snrnp40Q6PE01 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms