Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc2Q6PDG5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc2Q6PDG5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc2Q6PDG5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm15808-201ENSMUST00000119046 604 ntBASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm8712-201ENSMUST00000221090 701 ntBASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc2Q6PDG5 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc2Q6PDG5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms