Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm15370-201ENSMUST00000117158 253 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm13392-201ENSMUST00000117708 150 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm42627-201ENSMUST00000197347 224 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sp140Q6NSQ5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sp140Q6NSQ5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm13297-201ENSMUST00000120205 934 ntBASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm37489-201ENSMUST00000191883 159 ntBASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sp140Q6NSQ5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.32□□□□□ -0.44
Sp140Q6NSQ5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms