Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm28833-201ENSMUST00000189671 559 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Gm44814-201ENSMUST00000207018 434 ntBASIC11.22□□□□□ -0.61
AtmQ62388 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AtmQ62388 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.21□□□□□ -0.61
AtmQ62388 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.21□□□□□ -0.61
AtmQ62388 Gm23612-201ENSMUST00000103823 110 ntBASIC11.21□□□□□ -0.61
AtmQ62388 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.21□□□□□ -0.61
AtmQ62388 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Gm23576-201ENSMUST00000179918 110 ntBASIC11.21□□□□□ -0.61
AtmQ62388 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.21□□□□□ -0.61
AtmQ62388 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.21□□□□□ -0.61
AtmQ62388 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.21□□□□□ -0.61
AtmQ62388 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.21□□□□□ -0.61
AtmQ62388 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
AtmQ62388 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
AtmQ62388 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
AtmQ62388 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
AtmQ62388 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.21□□□□□ -0.62
AtmQ62388 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
AtmQ62388 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.21□□□□□ -0.62
AtmQ62388 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.21□□□□□ -0.62
AtmQ62388 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.21□□□□□ -0.62
AtmQ62388 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.21□□□□□ -0.62
AtmQ62388 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.21□□□□□ -0.62
AtmQ62388 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.21□□□□□ -0.62
AtmQ62388 Gm7082-201ENSMUST00000209880 969 ntBASIC11.21□□□□□ -0.62
AtmQ62388 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.21□□□□□ -0.62
AtmQ62388 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.21□□□□□ -0.62
AtmQ62388 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
AtmQ62388 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.21□□□□□ -0.62
AtmQ62388 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
AtmQ62388 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.2□□□□□ -0.62
AtmQ62388 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.2□□□□□ -0.62
AtmQ62388 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.2□□□□□ -0.62
AtmQ62388 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.2□□□□□ -0.62
AtmQ62388 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
AtmQ62388 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
AtmQ62388 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.2□□□□□ -0.62
AtmQ62388 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.2□□□□□ -0.62
AtmQ62388 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.2□□□□□ -0.62
AtmQ62388 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
AtmQ62388 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
AtmQ62388 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
AtmQ62388 Gm13039-201ENSMUST00000118638 794 ntBASIC11.2□□□□□ -0.62
AtmQ62388 Gm13624-201ENSMUST00000120263 462 ntBASIC11.2□□□□□ -0.62
AtmQ62388 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Gm25394-201ENSMUST00000157338 133 ntBASIC11.2□□□□□ -0.62
AtmQ62388 Gm4462-201ENSMUST00000166453 492 ntBASIC11.2□□□□□ -0.62
AtmQ62388 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC11.2□□□□□ -0.62
AtmQ62388 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.2□□□□□ -0.62
AtmQ62388 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
AtmQ62388 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
AtmQ62388 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
AtmQ62388 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms