Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm4034-201ENSMUST00000187674 480 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm43133-201ENSMUST00000197472 463 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm44405-201ENSMUST00000198952 126 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm39404-201ENSMUST00000216350 313 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm19309-201ENSMUST00000218295 205 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm45930-201ENSMUST00000221330 292 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.03□□□□□ -0.48
Scn2bQ56A07 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Scn2bQ56A07 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.02□□□□□ -0.48
Scn2bQ56A07 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.02□□□□□ -0.48
Scn2bQ56A07 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn2bQ56A07 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm3890-201ENSMUST00000182416 207 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm7399-201ENSMUST00000032395 858 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Cog3-203ENSMUST00000227473 4197 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Scn2bQ56A07 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn2bQ56A07 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.02□□□□□ -0.49
Scn2bQ56A07 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.01□□□□□ -0.49
Scn2bQ56A07 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scn2bQ56A07 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms