Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm25766-201ENSMUST00000104101 131 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm22711-201ENSMUST00000116890 133 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm5340-201ENSMUST00000203733 880 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fam196aQ3USH1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm13351-201ENSMUST00000118087 414 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm5714-201ENSMUST00000197343 566 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Trav11n-201ENSMUST00000200113 343 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm44506-201ENSMUST00000206278 965 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Fam196aQ3USH1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Fam196aQ3USH1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms