Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nlrc4Q3UP24 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm18056-201ENSMUST00000207670 568 ntBASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm18061-201ENSMUST00000208350 562 ntBASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm18063-201ENSMUST00000208529 568 ntBASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm18052-201ENSMUST00000208750 559 ntBASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Matn2-203ENSMUST00000226766 3252 ntBASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.83□□□□□ -0.36
Nlrc4Q3UP24 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Gm37666-201ENSMUST00000194110 866 ntBASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Gm7003-201ENSMUST00000195089 312 ntBASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nlrc4Q3UP24 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nlrc4Q3UP24 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nlrc4Q3UP24 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms