Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.8□□□□□ -0.36
Upf3aQ3ULJ3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm43058-201ENSMUST00000197645 625 ntBASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upf3aQ3ULJ3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upf3aQ3ULJ3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms