Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm11560-201ENSMUST00000117567 948 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Gm14892-201ENSMUST00000117636 267 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Gm14270-201ENSMUST00000118388 846 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Gm11578-201ENSMUST00000118530 459 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Gm12453-201ENSMUST00000121981 331 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Gm22846-201ENSMUST00000157706 270 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Gm40879-201ENSMUST00000220759 612 ntBASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sf3b2Q3UJB0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm23272-201ENSMUST00000104053 129 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm5700-201ENSMUST00000191483 989 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm42816-201ENSMUST00000198433 325 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm2553-201ENSMUST00000215986 605 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Olfr692-202ENSMUST00000217827 1126 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 CT030135.2-201ENSMUST00000225255 893 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm5451-201ENSMUST00000080545 579 ntBASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sf3b2Q3UJB0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm5419-201ENSMUST00000119301 527 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm14034-201ENSMUST00000120147 551 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm24248-201ENSMUST00000157321 322 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm22379-201ENSMUST00000157480 131 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm17214-201ENSMUST00000164501 541 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm7719-201ENSMUST00000182374 975 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Gm18968-201ENSMUST00000221319 862 ntBASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sf3b2Q3UJB0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms