Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trim63Q38HM4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim63Q38HM4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Defa-ps4-201ENSMUST00000118021 183 ntBASIC9.96□□□□□ -0.82
Trim63Q38HM4 Gm6222-201ENSMUST00000120787 396 ntBASIC9.96□□□□□ -0.82
Trim63Q38HM4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.96□□□□□ -0.82
Trim63Q38HM4 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.96□□□□□ -0.82
Trim63Q38HM4 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim63Q38HM4 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.95□□□□□ -0.82
Trim63Q38HM4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms