Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm10263-201ENSMUST00000085163 300 ntBASIC10.84□□□□□ -0.67
Chd8Q09XV5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.84□□□□□ -0.67
Chd8Q09XV5 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.84□□□□□ -0.67
Chd8Q09XV5 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Chd8Q09XV5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd8Q09XV5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Chd8Q09XV5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm15207-201ENSMUST00000119259 442 ntBASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm22344-201ENSMUST00000122642 278 ntBASIC10.83□□□□□ -0.68
Chd8Q09XV5 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm5040-201ENSMUST00000218609 800 ntBASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Mir339-201ENSMUST00000083659 96 ntBASIC10.83□□□□□ -0.68
Chd8Q09XV5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd8Q09XV5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms