Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm19353-201ENSMUST00000184561 445 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm18038-201ENSMUST00000197900 485 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm44551-201ENSMUST00000208804 171 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ebf1Q07802 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ebf1Q07802 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm13035-201ENSMUST00000117496 342 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm11941-201ENSMUST00000119904 610 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm15432-201ENSMUST00000121106 195 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm12208-201ENSMUST00000122004 163 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm11434-201ENSMUST00000122379 629 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm5369-201ENSMUST00000217499 588 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.35□□□□□ -0.43
Ebf1Q07802 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ebf1Q07802 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ebf1Q07802 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms