Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VcpQ01853 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VcpQ01853 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VcpQ01853 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.03□□□□□ -0.32
VcpQ01853 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VcpQ01853 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.03□□□□□ -0.32
VcpQ01853 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcpQ01853 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
VcpQ01853 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcpQ01853 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcpQ01853 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
VcpQ01853 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcpQ01853 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcpQ01853 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
VcpQ01853 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VcpQ01853 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VcpQ01853 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VcpQ01853 Gm13408-201ENSMUST00000119822 798 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Gm15703-201ENSMUST00000120250 880 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Gm13935-201ENSMUST00000121859 798 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VcpQ01853 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.02□□□□□ -0.33
VcpQ01853 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.02□□□□□ -0.33
VcpQ01853 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.02□□□□□ -0.33
VcpQ01853 Gm9540-201ENSMUST00000188230 478 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Gm4607-201ENSMUST00000206649 577 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.02□□□□□ -0.33
VcpQ01853 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.02□□□□□ -0.33
VcpQ01853 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
VcpQ01853 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
VcpQ01853 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.02□□□□□ -0.33
VcpQ01853 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VcpQ01853 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VcpQ01853 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.01□□□□□ -0.33
VcpQ01853 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
VcpQ01853 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.01□□□□□ -0.33
VcpQ01853 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
VcpQ01853 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.01□□□□□ -0.33
VcpQ01853 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.01□□□□□ -0.33
VcpQ01853 Gm7003-201ENSMUST00000195089 312 ntBASIC13.01□□□□□ -0.33
VcpQ01853 Gm8913-201ENSMUST00000209491 641 ntBASIC13.01□□□□□ -0.33
VcpQ01853 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.01□□□□□ -0.33
VcpQ01853 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.01□□□□□ -0.33
VcpQ01853 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.01□□□□□ -0.33
VcpQ01853 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.01□□□□□ -0.33
VcpQ01853 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VcpQ01853 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.01□□□□□ -0.33
VcpQ01853 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
VcpQ01853 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
VcpQ01853 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VcpQ01853 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VcpQ01853 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms