Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col1a2Q01149 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col1a2Q01149 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Col1a2Q01149 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.13■□□□□ 0.01
Col1a2Q01149 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Col1a2Q01149 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm15352-201ENSMUST00000118696 270 ntBASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.13■□□□□ 0.01
Col1a2Q01149 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm29499-201ENSMUST00000189151 486 ntBASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm28329-201ENSMUST00000191208 689 ntBASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm29171-201ENSMUST00000191397 486 ntBASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Col1a2Q01149 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col1a2Q01149 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Gm12029-201ENSMUST00000120073 832 ntBASIC15.12■□□□□ 0.01
Col1a2Q01149 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Gm44545-201ENSMUST00000208262 746 ntBASIC15.12■□□□□ 0.01
Col1a2Q01149 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC15.12■□□□□ 0.01
Col1a2Q01149 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC15.12■□□□□ 0.01
Col1a2Q01149 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col1a2Q01149 Gm22920-201ENSMUST00000102175 109 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm4726-201ENSMUST00000135604 736 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm6019-201ENSMUST00000148369 736 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm10731-201ENSMUST00000181171 448 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm27390-201ENSMUST00000184516 176 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm38151-201ENSMUST00000195085 289 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.11■□□□□ 0.01
Col1a2Q01149 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Col1a2Q01149 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col1a2Q01149 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Col1a2Q01149 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms