Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Trav11n-201ENSMUST00000200113 343 ntBASIC11.25□□□□□ -0.61
Cacna1aP97445 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.25□□□□□ -0.61
Cacna1aP97445 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm11509-201ENSMUST00000117358 325 ntBASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm15352-201ENSMUST00000118696 270 ntBASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.25□□□□□ -0.61
Cacna1aP97445 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm37458-201ENSMUST00000194055 410 ntBASIC11.25□□□□□ -0.61
Cacna1aP97445 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cacna1aP97445 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.25□□□□□ -0.61
Cacna1aP97445 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm44958-201ENSMUST00000203734 736 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm19009-201ENSMUST00000223072 823 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm13549-201ENSMUST00000118339 796 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm5419-201ENSMUST00000119301 527 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cacna1aP97445 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.23□□□□□ -0.61
Cacna1aP97445 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cacna1aP97445 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.23□□□□□ -0.61
Cacna1aP97445 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cacna1aP97445 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms