Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nkx2-3P97334 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm11628-201ENSMUST00000117568 171 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm8737-201ENSMUST00000122208 642 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm6485-201ENSMUST00000160676 439 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm3150-201ENSMUST00000166418 204 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm38151-201ENSMUST00000195085 289 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.21■□□□□ 0.03
Nkx2-3P97334 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nkx2-3P97334 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Nkx2-3P97334 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Gm37028-201ENSMUST00000194276 107 ntBASIC15.2■□□□□ 0.02
Nkx2-3P97334 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Olfr584-201ENSMUST00000098210 964 ntBASIC15.2■□□□□ 0.02
Nkx2-3P97334 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.2■□□□□ 0.02
Nkx2-3P97334 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.2■□□□□ 0.02
Nkx2-3P97334 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nkx2-3P97334 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm11451-201ENSMUST00000118946 630 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm8492-201ENSMUST00000182375 987 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm29499-201ENSMUST00000189151 486 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm28329-201ENSMUST00000191208 689 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 Gm29171-201ENSMUST00000191397 486 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx2-3P97334 AC166341.2-201ENSMUST00000220571 120 ntBASIC15.19■□□□□ 0.02
Nkx2-3P97334 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms