Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
SgcaP82350 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
SgcaP82350 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
SgcaP82350 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SgcaP82350 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SgcaP82350 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.21□□□□□ -0.77
SgcaP82350 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.21□□□□□ -0.77
SgcaP82350 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.21□□□□□ -0.77
SgcaP82350 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SgcaP82350 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
SgcaP82350 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.21□□□□□ -0.77
SgcaP82350 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.21□□□□□ -0.77
SgcaP82350 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.21□□□□□ -0.77
SgcaP82350 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SgcaP82350 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
SgcaP82350 Mir8102-201ENSMUST00000184148 139 ntBASIC10.21□□□□□ -0.77
SgcaP82350 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcaP82350 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SgcaP82350 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.21□□□□□ -0.78
SgcaP82350 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.21□□□□□ -0.78
SgcaP82350 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.21□□□□□ -0.78
SgcaP82350 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcaP82350 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.2□□□□□ -0.78
SgcaP82350 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Gm15920-201ENSMUST00000118998 402 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Gm15487-201ENSMUST00000122373 465 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.2□□□□□ -0.78
SgcaP82350 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SgcaP82350 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Gm23363-201ENSMUST00000175024 79 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Mir7684-201ENSMUST00000183858 60 ntBASIC10.2□□□□□ -0.78
SgcaP82350 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Gm27838-201ENSMUST00000184829 128 ntBASIC10.2□□□□□ -0.78
SgcaP82350 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.2□□□□□ -0.78
SgcaP82350 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcaP82350 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.2□□□□□ -0.78
SgcaP82350 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcaP82350 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SgcaP82350 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms