Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shox2P70390 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shox2P70390 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.99□□□□□ -0.49
Shox2P70390 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shox2P70390 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.99□□□□□ -0.49
Shox2P70390 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.99□□□□□ -0.49
Shox2P70390 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.99□□□□□ -0.49
Shox2P70390 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Shox2P70390 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Shox2P70390 Gm28760-201ENSMUST00000185995 736 ntBASIC11.99□□□□□ -0.49
Shox2P70390 Gm29667-201ENSMUST00000190817 490 ntBASIC11.99□□□□□ -0.49
Shox2P70390 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.99□□□□□ -0.49
Shox2P70390 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.99□□□□□ -0.49
Shox2P70390 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.99□□□□□ -0.49
Shox2P70390 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shox2P70390 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shox2P70390 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.99□□□□□ -0.49
Shox2P70390 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shox2P70390 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shox2P70390 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.98□□□□□ -0.49
Shox2P70390 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Shox2P70390 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Shox2P70390 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Gm8805-201ENSMUST00000117848 313 ntBASIC11.98□□□□□ -0.49
Shox2P70390 Gm16479-201ENSMUST00000121706 932 ntBASIC11.98□□□□□ -0.49
Shox2P70390 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.98□□□□□ -0.49
Shox2P70390 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Shox2P70390 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.98□□□□□ -0.49
Shox2P70390 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Gm10254-201ENSMUST00000052888 867 ntBASIC11.98□□□□□ -0.49
Shox2P70390 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.98□□□□□ -0.49
Shox2P70390 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Shox2P70390 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shox2P70390 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms