Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Lhx1P63006 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Lhx1P63006 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx1P63006 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Lhx1P63006 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lhx1P63006 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Lhx1P63006 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Gm26286-201ENSMUST00000104166 134 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Lhx1P63006 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.95□□□□□ -0.5
Lhx1P63006 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Lhx1P63006 Gm8343-201ENSMUST00000182705 994 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Gm4157-201ENSMUST00000211647 679 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.95□□□□□ -0.5
Lhx1P63006 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.95□□□□□ -0.5
Lhx1P63006 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.95□□□□□ -0.5
Lhx1P63006 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx1P63006 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lhx1P63006 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Gm5419-201ENSMUST00000119301 527 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Gm26461-201ENSMUST00000175064 290 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Gm5706-201ENSMUST00000181525 993 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.94□□□□□ -0.5
Lhx1P63006 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx1P63006 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.94□□□□□ -0.5
Lhx1P63006 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms