Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm14127-201ENSMUST00000117906 678 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm12036-201ENSMUST00000120008 530 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm13899-201ENSMUST00000121519 1255 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sf3b6P59708 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm29649-201ENSMUST00000185649 419 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm37497-201ENSMUST00000195830 798 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sf3b6P59708 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.81□□□□□ -0.68
Sf3b6P59708 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Sf3b6P59708 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b6P59708 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Gm8213-201ENSMUST00000118191 441 ntBASIC10.8□□□□□ -0.68
Sf3b6P59708 Gm13829-201ENSMUST00000119600 138 ntBASIC10.8□□□□□ -0.68
Sf3b6P59708 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Gm8652-201ENSMUST00000181363 964 ntBASIC10.8□□□□□ -0.68
Sf3b6P59708 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Sf3b6P59708 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.8□□□□□ -0.68
Sf3b6P59708 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b6P59708 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.8□□□□□ -0.68
Sf3b6P59708 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b6P59708 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b6P59708 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b6P59708 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms