Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm18038-201ENSMUST00000197900 485 ntBASIC12.23□□□□□ -0.45
SmoP56726 Gm18893-201ENSMUST00000198416 943 ntBASIC12.23□□□□□ -0.45
SmoP56726 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.23□□□□□ -0.45
SmoP56726 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.23□□□□□ -0.45
SmoP56726 Gm270-201ENSMUST00000223010 976 ntBASIC12.23□□□□□ -0.45
SmoP56726 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SmoP56726 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SmoP56726 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SmoP56726 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SmoP56726 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
SmoP56726 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.22□□□□□ -0.45
SmoP56726 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.22□□□□□ -0.45
SmoP56726 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.22□□□□□ -0.45
SmoP56726 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SmoP56726 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.22□□□□□ -0.45
SmoP56726 Mir5120-201ENSMUST00000175020 78 ntBASIC12.22□□□□□ -0.45
SmoP56726 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.22□□□□□ -0.45
SmoP56726 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.22□□□□□ -0.45
SmoP56726 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SmoP56726 AU022133-201ENSMUST00000200601 873 ntBASIC12.22□□□□□ -0.45
SmoP56726 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SmoP56726 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
SmoP56726 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SmoP56726 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SmoP56726 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.22□□□□□ -0.45
SmoP56726 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SmoP56726 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SmoP56726 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SmoP56726 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.21□□□□□ -0.45
SmoP56726 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SmoP56726 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SmoP56726 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SmoP56726 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.21□□□□□ -0.45
SmoP56726 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.21□□□□□ -0.45
SmoP56726 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.21□□□□□ -0.45
SmoP56726 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Mir7677-201ENSMUST00000184226 67 ntBASIC12.21□□□□□ -0.45
SmoP56726 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SmoP56726 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SmoP56726 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SmoP56726 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SmoP56726 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SmoP56726 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SmoP56726 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
SmoP56726 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms