Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CckbrP56481 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.3□□□□□ -0.6
CckbrP56481 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.3□□□□□ -0.6
CckbrP56481 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CckbrP56481 Gm12015-201ENSMUST00000117065 843 ntBASIC11.3□□□□□ -0.6
CckbrP56481 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.3□□□□□ -0.6
CckbrP56481 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
CckbrP56481 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CckbrP56481 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.3□□□□□ -0.6
CckbrP56481 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.3□□□□□ -0.6
CckbrP56481 Gm19994-201ENSMUST00000217086 586 ntBASIC11.3□□□□□ -0.6
CckbrP56481 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.3□□□□□ -0.6
CckbrP56481 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.3□□□□□ -0.6
CckbrP56481 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.3□□□□□ -0.6
CckbrP56481 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.3□□□□□ -0.6
CckbrP56481 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CckbrP56481 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
CckbrP56481 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
CckbrP56481 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CckbrP56481 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CckbrP56481 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CckbrP56481 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
CckbrP56481 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.29□□□□□ -0.6
CckbrP56481 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Gm13350-201ENSMUST00000120519 479 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.29□□□□□ -0.6
CckbrP56481 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.29□□□□□ -0.6
CckbrP56481 Gm8885-201ENSMUST00000189382 598 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm37259-201ENSMUST00000193903 849 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm18711-201ENSMUST00000199341 750 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm19187-201ENSMUST00000206781 892 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm13097-201ENSMUST00000210722 397 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.29□□□□□ -0.6
CckbrP56481 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.29□□□□□ -0.6
CckbrP56481 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CckbrP56481 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.29□□□□□ -0.6
CckbrP56481 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CckbrP56481 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
CckbrP56481 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CckbrP56481 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.28□□□□□ -0.6
CckbrP56481 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CckbrP56481 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CckbrP56481 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CckbrP56481 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms