Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm12314-201ENSMUST00000118104 538 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 Gm13342-201ENSMUST00000121055 207 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm13316-201ENSMUST00000140537 691 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm45880-201ENSMUST00000213041 853 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Fdft1P53798 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Fdft1P53798 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.18□□□□□ -0.46
Fdft1P53798 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Fdft1P53798 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.18□□□□□ -0.46
Fdft1P53798 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Fdft1P53798 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Gm9083-201ENSMUST00000120423 819 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Gm37424-201ENSMUST00000191727 561 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Gm43133-201ENSMUST00000197472 463 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Gm35960-201ENSMUST00000202712 767 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Gm39404-201ENSMUST00000216350 313 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Fdft1P53798 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Fdft1P53798 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Fdft1P53798 Gm10076-201ENSMUST00000073238 384 ntBASIC12.17□□□□□ -0.46
Fdft1P53798 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.17□□□□□ -0.46
Fdft1P53798 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Fdft1P53798 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Mir1247-201ENSMUST00000116706 82 ntBASIC12.16□□□□□ -0.46
Fdft1P53798 Gm12957-201ENSMUST00000117835 377 ntBASIC12.16□□□□□ -0.46
Fdft1P53798 Gm14127-201ENSMUST00000117906 678 ntBASIC12.16□□□□□ -0.46
Fdft1P53798 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.16□□□□□ -0.46
Fdft1P53798 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.16□□□□□ -0.46
Fdft1P53798 Gm27023-201ENSMUST00000182372 285 ntBASIC12.16□□□□□ -0.46
Fdft1P53798 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.16□□□□□ -0.46
Fdft1P53798 Gm38002-201ENSMUST00000193255 180 ntBASIC12.16□□□□□ -0.46
Fdft1P53798 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fdft1P53798 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms