Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.83□□□□□ -0.52
Lbx1P52955 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Gm12314-201ENSMUST00000118104 538 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 Gm12684-201ENSMUST00000118675 999 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 Gm22379-201ENSMUST00000157480 131 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 Gm7627-201ENSMUST00000183205 999 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.83□□□□□ -0.52
Lbx1P52955 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Lbx1P52955 Gm43547-201ENSMUST00000197729 328 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.83□□□□□ -0.52
Lbx1P52955 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.83□□□□□ -0.52
Lbx1P52955 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lbx1P52955 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.83□□□□□ -0.52
Lbx1P52955 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lbx1P52955 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lbx1P52955 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lbx1P52955 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm12986-201ENSMUST00000119037 967 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm16296-201ENSMUST00000159905 325 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 Gm7238-201ENSMUST00000206467 973 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.82□□□□□ -0.52
Lbx1P52955 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lbx1P52955 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.82□□□□□ -0.52
Lbx1P52955 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lbx1P52955 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lbx1P52955 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lbx1P52955 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.82□□□□□ -0.52
Lbx1P52955 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lbx1P52955 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lbx1P52955 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.81□□□□□ -0.52
Lbx1P52955 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Lbx1P52955 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lbx1P52955 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.81□□□□□ -0.52
Lbx1P52955 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.81□□□□□ -0.52
Lbx1P52955 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lbx1P52955 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lbx1P52955 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lbx1P52955 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lbx1P52955 Gm24078-201ENSMUST00000158184 103 ntBASIC11.81□□□□□ -0.52
Lbx1P52955 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.81□□□□□ -0.52
Lbx1P52955 Gm29499-201ENSMUST00000189151 486 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms