Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm13492-201ENSMUST00000119772 665 ntBASIC11.38□□□□□ -0.59
Sox2P48432 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.38□□□□□ -0.59
Sox2P48432 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Sox2P48432 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox2P48432 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox2P48432 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.38□□□□□ -0.59
Sox2P48432 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox2P48432 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox2P48432 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.38□□□□□ -0.59
Sox2P48432 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox2P48432 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox2P48432 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.37□□□□□ -0.59
Sox2P48432 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox2P48432 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox2P48432 Gm7029-201ENSMUST00000173226 450 ntBASIC11.37□□□□□ -0.59
Sox2P48432 Gm24196-201ENSMUST00000179161 110 ntBASIC11.37□□□□□ -0.59
Sox2P48432 Gm18304-201ENSMUST00000189162 546 ntBASIC11.37□□□□□ -0.59
Sox2P48432 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Gm45384-201ENSMUST00000210451 277 ntBASIC11.37□□□□□ -0.59
Sox2P48432 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox2P48432 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.37□□□□□ -0.59
Sox2P48432 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Gm10012-201ENSMUST00000078252 192 ntBASIC11.37□□□□□ -0.59
Sox2P48432 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Sox2P48432 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.37□□□□□ -0.59
Sox2P48432 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox2P48432 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox2P48432 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Sox2P48432 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.36□□□□□ -0.59
Sox2P48432 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Gm22331-201ENSMUST00000158066 136 ntBASIC11.36□□□□□ -0.59
Sox2P48432 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox2P48432 Gm29705-201ENSMUST00000212598 474 ntBASIC11.36□□□□□ -0.59
Sox2P48432 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox2P48432 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms