Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm31274-201ENSMUST00000197356 229 ntBASIC12.55□□□□□ -0.4
HttP42859 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.55□□□□□ -0.4
HttP42859 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.55□□□□□ -0.4
HttP42859 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Gm12247-201ENSMUST00000117585 670 ntBASIC12.55□□□□□ -0.4
HttP42859 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.55□□□□□ -0.4
HttP42859 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.55□□□□□ -0.4
HttP42859 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.55□□□□□ -0.4
HttP42859 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HttP42859 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HttP42859 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HttP42859 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.54□□□□□ -0.4
HttP42859 Gm44605-201ENSMUST00000206892 949 ntBASIC12.54□□□□□ -0.4
HttP42859 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HttP42859 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.54□□□□□ -0.4
HttP42859 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HttP42859 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.54□□□□□ -0.4
HttP42859 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HttP42859 Gm9369-201ENSMUST00000196009 733 ntBASIC12.54□□□□□ -0.4
HttP42859 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.54□□□□□ -0.4
HttP42859 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HttP42859 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HttP42859 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.53□□□□□ -0.4
HttP42859 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HttP42859 Gm16209-201ENSMUST00000118457 627 ntBASIC12.53□□□□□ -0.4
HttP42859 Gm10171-201ENSMUST00000126220 628 ntBASIC12.53□□□□□ -0.4
HttP42859 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.53□□□□□ -0.4
HttP42859 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.53□□□□□ -0.4
HttP42859 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HttP42859 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.53□□□□□ -0.4
HttP42859 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.53□□□□□ -0.4
HttP42859 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.53□□□□□ -0.4
HttP42859 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.53□□□□□ -0.4
HttP42859 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Gm10233-201ENSMUST00000089275 628 ntBASIC12.53□□□□□ -0.4
HttP42859 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
HttP42859 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.53□□□□□ -0.4
HttP42859 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.53□□□□□ -0.4
HttP42859 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
HttP42859 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.53□□□□□ -0.4
HttP42859 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.53□□□□□ -0.4
HttP42859 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.53□□□□□ -0.4
HttP42859 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.53□□□□□ -0.4
HttP42859 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
HttP42859 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HttP42859 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.53□□□□□ -0.4
HttP42859 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Gm23912-201ENSMUST00000104687 87 ntBASIC12.53□□□□□ -0.4
HttP42859 Mir1249-201ENSMUST00000116791 98 ntBASIC12.53□□□□□ -0.4
HttP42859 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.53□□□□□ -0.4
HttP42859 Gm5468-202ENSMUST00000227851 682 ntBASIC12.53□□□□□ -0.4
HttP42859 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HttP42859 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HttP42859 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HttP42859 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
HttP42859 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.52□□□□□ -0.4
HttP42859 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HttP42859 Gm23582-201ENSMUST00000158530 139 ntBASIC12.52□□□□□ -0.4
HttP42859 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.52□□□□□ -0.4
HttP42859 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.4
HttP42859 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms